Add percent of gene set defined by a regular expression pattern to colData(sce)

Source: R/annotate_gex_qc.R

Add percent of gene set defined by a regular expression pattern to colData(sce)

annotate_pct_gene_set(sce, pattern, name, alt_exp = NULL)

Arguments

sce

SingleCellExperiment object
pattern

Regular expression for gene names to sum up expression
name

Column name to save data in colData(sce)

Value

Examples

NULL
#> NULL