R/compute_evenness_profile.R
compute_evenness_profile_long.Rd
Compute tidied data frame of evenness profiles per group based on clonotype frequency distributions
compute_evenness_profile_long( sce_list, group_by = c(), min_alpha = 0, max_alpha = 10, alpha_steps = 51 )
sce_list | Named list of SingleCellExperiment objects |
---|---|
group_by | Character vector of column names from colData to use to construct groups for clonotype counting |
min_alpha | Minimum Renyi entropy alpha |
max_alpha | Maximum Renyi entropy alpha |
alpha_steps | Number of steps in between min_alpha and max_alpha |
NULL#> NULL