Compute matrix of evenness profiles per group based on clonotype frequency distributions

compute_evenness_profile_matrix(
  sce_list,
  group_by = c(),
  min_alpha = 0,
  max_alpha = 10,
  alpha_steps = 51
)

Arguments

sce_list

list of SingleCellExperiment objects

group_by

column names from colData to use to construct groups for clonotype counting

min_alpha

minimum Renyi entropy alpha

max_alpha

maximum Renyi entropy alpha

alpha_steps

number of steps in between min_alpha and max_alpha

Value

Examples

NULL
#> NULL