Encode frequencies of (combinations) of values in columns from colData into a matrix with rows as groups and columns as features

Encode frequencies of (combinations) of values in columns from colData into a matrix with rows as groups and columns as features

encode_cell_identity_frequency_matrix(
  sce_list,
  attributes,
  group_by = c(),
  normalize = "none"
)

Arguments

sce_list	Llist of SCE objects, all containing relevant attributes in colData as columns
attributes	column names from colData which to encode
group_by	column names from colData which to group by (compute frequencies per group)
normalize	normalization method - either "none" or "relative_frequency"

Value

Examples

NULL
#> NULL